STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45887.1TIGR02185 family protein. (211 aa)    
Predicted Functional Partners:
AFN47132.1
Cobalt transport domain protein.
 
     0.953
AFN46687.1
ABC transporter, ATP-binding protein.
 
    0.950
AFN46817.1
Cobalt transport protein.
 
     0.860
AFN45273.1
ABC transporter, ATP-binding protein.
 
    0.852
AFN45504.1
ABC transporter, ATP-binding protein.
 
    0.792
AFN45416.1
ABC transporter, ATP-binding protein.
 
    0.792
AFN45895.1
Cobalt transport protein.
 
     0.779
AFN47230.1
Transcriptional regulator, AraC family.
 
    0.762
AFN46827.1
ABC transporter, ATP-binding protein.
 
     0.758
AFN45249.1
ABC transporter transmembrane region.
 
     0.727
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.