Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFN45005.1 | AFN45307.1 | HMPREF9154_2923 | HMPREF9154_2920 | Periplasmic-binding protein. | CobN/magnesium chelatase domain protein. | 0.826 |
AFN45005.1 | AFN46261.1 | HMPREF9154_2923 | HMPREF9154_2921 | Periplasmic-binding protein. | Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE. | 0.926 |
AFN45005.1 | AFN47613.1 | HMPREF9154_2923 | HMPREF9154_2919 | Periplasmic-binding protein. | Putative lipoprotein. | 0.709 |
AFN45005.1 | AFN47681.1 | HMPREF9154_2923 | HMPREF9154_2922 | Periplasmic-binding protein. | Putative ferrichrome transport system permease protein FhuG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.946 |
AFN45005.1 | bchI_1 | HMPREF9154_2923 | HMPREF9154_2917 | Periplasmic-binding protein. | Magnesium-chelatase 38 kDa subunit; Overlaps another CDS with the same product name. | 0.781 |
AFN45005.1 | bchI_2 | HMPREF9154_2923 | HMPREF9154_2918 | Periplasmic-binding protein. | Magnesium-chelatase 38 kDa subunit; Overlaps another CDS with the same product name. | 0.794 |
AFN45005.1 | hemH | HMPREF9154_2923 | HMPREF9154_1803 | Periplasmic-binding protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.474 |
AFN45133.1 | AFN46611.1 | HMPREF9154_0042 | HMPREF9154_1800 | Hypothetical protein. | Thi4 domain protein. | 0.923 |
AFN45133.1 | bchI_1 | HMPREF9154_0042 | HMPREF9154_2917 | Hypothetical protein. | Magnesium-chelatase 38 kDa subunit; Overlaps another CDS with the same product name. | 0.900 |
AFN45133.1 | bchI_2 | HMPREF9154_0042 | HMPREF9154_2918 | Hypothetical protein. | Magnesium-chelatase 38 kDa subunit; Overlaps another CDS with the same product name. | 0.900 |
AFN45133.1 | hemH | HMPREF9154_0042 | HMPREF9154_1803 | Hypothetical protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.919 |
AFN45307.1 | AFN45005.1 | HMPREF9154_2920 | HMPREF9154_2923 | CobN/magnesium chelatase domain protein. | Periplasmic-binding protein. | 0.826 |
AFN45307.1 | AFN46261.1 | HMPREF9154_2920 | HMPREF9154_2921 | CobN/magnesium chelatase domain protein. | Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE. | 0.782 |
AFN45307.1 | AFN47613.1 | HMPREF9154_2920 | HMPREF9154_2919 | CobN/magnesium chelatase domain protein. | Putative lipoprotein. | 0.721 |
AFN45307.1 | AFN47681.1 | HMPREF9154_2920 | HMPREF9154_2922 | CobN/magnesium chelatase domain protein. | Putative ferrichrome transport system permease protein FhuG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.788 |
AFN45307.1 | bchI_1 | HMPREF9154_2920 | HMPREF9154_2917 | CobN/magnesium chelatase domain protein. | Magnesium-chelatase 38 kDa subunit; Overlaps another CDS with the same product name. | 0.963 |
AFN45307.1 | bchI_2 | HMPREF9154_2920 | HMPREF9154_2918 | CobN/magnesium chelatase domain protein. | Magnesium-chelatase 38 kDa subunit; Overlaps another CDS with the same product name. | 0.982 |
AFN45307.1 | cobJ | HMPREF9154_2920 | HMPREF9154_0396 | CobN/magnesium chelatase domain protein. | precorrin-3B C(17)-methyltransferase. | 0.966 |
AFN46261.1 | AFN45005.1 | HMPREF9154_2921 | HMPREF9154_2923 | Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE. | Periplasmic-binding protein. | 0.926 |
AFN46261.1 | AFN45307.1 | HMPREF9154_2921 | HMPREF9154_2920 | Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE. | CobN/magnesium chelatase domain protein. | 0.782 |
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