STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47300.1BMC domain protein. (117 aa)    
Predicted Functional Partners:
AFN45269.1
Putative ethanolamine utilization protein, EutP; Belongs to the EutP/PduV family.
 
  
 0.962
eutJ
Ethanolamine utilization protein EutJ.
 
   
 0.850
AFN45872.1
Histidine kinase sensor domain protein.
     
 0.825
AFN46395.1
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
 
   
 0.775
csoS1A_1
Major carboxysome shell protein 1A.
 
  
 0.764
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
 
   
 0.691
csoS1A_2
Major carboxysome shell protein 1A.
 
  
 0.674
AFN46404.1
Putative alcohol dehydrogenase (acceptor).
     
 0.622
AFN45576.1
BMC domain protein.
 
  
 0.613
AFN46026.1
Response regulator receiver domain protein.
 
   
 0.610
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.