STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csoS1A_2Major carboxysome shell protein 1A. (90 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
 
 
 0.987
eutJ
Ethanolamine utilization protein EutJ.
 
  
 0.917
AFN45680.1
Propanediol utilization protein PduL.
 
  
 0.872
AFN47240.1
Aldehyde-alcohol dehydrogenase domain protein.
 
  
 0.846
AFN46395.1
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
  
  
 0.834
AFN45341.1
PduH family protein.
  
  
 0.803
AFN45576.1
BMC domain protein.
 
    
0.797
dhaF
Glycerol dehydratase reactivation factor, large subunit.
  
    0.789
AFN45049.1
Flavoprotein domain protein.
       0.782
mdh_2
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
       0.773
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.