Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
csoS1A_2Major carboxysome shell protein 1A. (90 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
 
 
 0.986
eutJ
Ethanolamine utilization protein EutJ.
 
  
 0.913
AFN45680.1
Propanediol utilization protein PduL.
 
  
 0.870
AFN47240.1
Aldehyde-alcohol dehydrogenase domain protein.
 
   
 0.842
AFN46395.1
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
  
  
 0.833
AFN45576.1
BMC domain protein.
 
    
0.796
AFN45341.1
PduH family protein.
  
  
 0.791
AFN45049.1
Flavoprotein domain protein.
       0.782
dhaF
Glycerol dehydratase reactivation factor, large subunit.
  
    0.781
mdh_2
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
       0.773
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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