STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46395.1ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (374 aa)    
Predicted Functional Partners:
AFN45341.1
PduH family protein.
 
   
 0.964
dhaF
Glycerol dehydratase reactivation factor, large subunit.
 
  
 0.963
AFN45680.1
Propanediol utilization protein PduL.
  
  
 0.961
dhaC
Glycerol dehydratase, medium subunit.
 
  
 0.955
dhaB
Glycerol dehydratase, large subunit.
 
  
 0.941
dhaE
Glycerol dehydratase, small subunit.
 
  
 0.939
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
     
 0.935
pduB
Propanediol utilization protein PduB.
 
  
 0.929
AFN45872.1
Histidine kinase sensor domain protein.
 
   
 0.902
eutJ
Ethanolamine utilization protein EutJ.
 
   
 0.902
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.