STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46395.1ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (374 aa)    
Predicted Functional Partners:
dhaF
Glycerol dehydratase reactivation factor, large subunit.
 
  
 0.962
AFN45341.1
PduH family protein.
 
  
 0.961
dhaC
Glycerol dehydratase, medium subunit.
 
  
 0.948
AFN45680.1
Propanediol utilization protein PduL.
  
  
 0.947
dhaB
Glycerol dehydratase, large subunit.
 
  
 0.944
dhaE
Glycerol dehydratase, small subunit.
 
   
 0.936
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
     
 0.932
pduB
Propanediol utilization protein PduB.
 
  
 0.924
eutJ
Ethanolamine utilization protein EutJ.
 
   
 0.907
cobJ
precorrin-3B C(17)-methyltransferase.
     
 0.888
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.