STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46039.1Virulence factor MVIN domain protein. (484 aa)    
Predicted Functional Partners:
AFN45417.1
Nucleotidyl transferase.
  
  
 0.790
AFN47384.1
Bacterial sugar transferase.
  
  
 0.777
AFN45984.1
Nucleotide sugar dehydrogenase.
  
  
 0.712
AFN46224.1
Nucleotide sugar dehydrogenase.
  
  
 0.712
spsC
Spore coat polysaccharide biosynthesis protein SpsC; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.676
AFN46979.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.629
AFN47463.1
KR domain protein.
  
  
 0.589
AFN46007.1
Nonribosomal peptide synthase.
  
  
 0.566
AFN45942.1
Hypothetical protein.
  
  
 0.535
dltB
D-alanyl-lipoteichoic acid biosynthesis protein DltB; Belongs to the membrane-bound acyltransferase family.
  
  
 0.469
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.