STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46039.1Virulence factor MVIN domain protein. (484 aa)    
Predicted Functional Partners:
AFN45417.1
Nucleotidyl transferase.
  
  
 0.810
AFN47384.1
Bacterial sugar transferase.
  
  
 0.787
AFN45984.1
Nucleotide sugar dehydrogenase.
  
  
 0.727
AFN46224.1
Nucleotide sugar dehydrogenase.
  
  
 0.727
spsC
Spore coat polysaccharide biosynthesis protein SpsC; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.685
AFN47463.1
KR domain protein.
  
  
 0.618
AFN46979.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.615
AFN45942.1
Hypothetical protein.
  
  
 0.592
AFN46007.1
Nonribosomal peptide synthase.
  
  
 0.558
AFN45077.1
Polysaccharide biosynthesis protein.
  
  
 0.500
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (24%) [HD]