Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AFN46200.1Iron dependent repressor, metal binding/dimerization domain protein. (227 aa)    
Predicted Functional Partners:
AFN46488.1
Hypothetical protein.
       0.773
AFN45374.1
ABC 3 transport family protein.
  
 0.702
AFN46654.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
  
    0.671
mntP
Putative membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
     
 0.635
AFN47391.1
Transcriptional regulator, GntR family.
   
    0.619
cobB-2
Transcriptional regulator, Sir2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.581
AFN46048.1
Transcriptional regulator, Sir2 family.
   
    0.581
AFN47226.1
Hypothetical protein.
   
    0.568
mntA
Manganese transport system ATP-binding protein MntA.
 
  
 0.560
AFN46647.1
Putative FeS assembly protein SufD.
     
 0.555
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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