STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45651.1enoyl-CoA hydratase/isomerase family protein. (305 aa)    
Predicted Functional Partners:
AFN47463.1
KR domain protein.
 
 0.947
AFN47687.1
Putative polyketide biosynthesis enoyl-CoA isomerase PksI; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.802
fabD
[acyl-carrier-protein] S-malonyltransferase.
  
  
 0.782
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
   0.732
rpsP
Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
   0.728
rpmJ
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.720
rplQ
Ribosomal protein L17.
    
   0.715
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 
 0.711
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
    
   0.710
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
    
   0.686
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.