STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45102.1Branched-chain amino acid transport protein AzlD. (102 aa)    
Predicted Functional Partners:
AFN47214.1
AzlC protein.
 
  
 0.980
AFN46334.1
Transcriptional regulator, TetR family.
       0.773
AFN46021.1
Dynamin domain protein.
  
     0.633
AFN45393.1
Dynamin family protein.
  
     0.580
trxB
Thioredoxin-disulfide reductase.
       0.536
AFN45511.1
Hypothetical protein.
  
     0.533
AFN45106.1
Hypothetical protein.
       0.507
AFN47803.1
FHA domain protein.
  
     0.495
trxA_2
Thioredoxin; Belongs to the thioredoxin family.
       0.464
AFN46134.1
Hypothetical protein.
       0.464
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.