Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEA20304.1Hypothetical protein. (654 aa)    
Predicted Functional Partners:
AEA21121.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494.
 
  
 0.765
AEA20261.1
Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616.
 
    0.728
AEA20242.1
Hypothetical protein.
  
     0.695
AEA20065.1
Aldose 1-epimerase; Identified by match to protein family HMM PF01263; match to protein family HMM PF04616.
  
  
 0.663
AEA22045.1
Hypothetical protein; Identified by glimmer; putative.
       0.501
AEA20301.1
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494.
 
  
 0.489
AEA21454.1
Identified by match to protein family HMM PF07980.
 
    0.479
AEA21045.1
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR04056; match to protein family HMM TIGR04057.
 
    0.459
AEA22180.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF00532; match to protein family HMM PF02518.
  
  
 0.456
AEA21592.1
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF00532.
  
  
 0.452
Your Current Organism:
Prevotella denticola
NCBI taxonomy Id: 767031
Other names: P. denticola F0289, Prevotella denticola F0289, Prevotella denticola str. F0289, Prevotella denticola strain F0289
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