Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEA21686.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AEA21001.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412.
  
 
 0.862
AEA20181.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
       0.728
AEA21751.1
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
       0.719
AEA21937.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.
  
 
 0.510
AEA22048.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
 
 0.510
AEA21309.1
Outer membrane efflux protein.
  
 
 0.510
AEA20611.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; Identified by match to protein family HMM PF02321.
  
 
 0.510
AEA21626.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
  
 
 0.421
AEA22034.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412.
  
 
 0.421
Your Current Organism:
Prevotella denticola
NCBI taxonomy Id: 767031
Other names: P. denticola F0289, Prevotella denticola F0289, Prevotella denticola str. F0289, Prevotella denticola strain F0289
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