Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGL35433.1 | EGL38490.1 | HMPREF9126_1499 | HMPREF9126_0092 | R3H domain protein; Identified by match to protein family HMM PF01424. | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.821 |
| EGL35433.1 | EGL38941.1 | HMPREF9126_1499 | HMPREF9126_0297 | R3H domain protein; Identified by match to protein family HMM PF01424. | Hypothetical protein; Belongs to the UPF0109 family. | 0.990 |
| EGL38490.1 | EGL35433.1 | HMPREF9126_0092 | HMPREF9126_1499 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | R3H domain protein; Identified by match to protein family HMM PF01424. | 0.821 |
| EGL38490.1 | EGL38618.1 | HMPREF9126_0092 | HMPREF9126_0028 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; Displays ATPase and GTPase activities. | 0.946 |
| EGL38490.1 | EGL38758.1 | HMPREF9126_0092 | HMPREF9126_0091 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.762 |
| EGL38490.1 | EGL38941.1 | HMPREF9126_0092 | HMPREF9126_0297 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; Belongs to the UPF0109 family. | 0.809 |
| EGL38490.1 | cshA | HMPREF9126_0092 | HMPREF9126_1409 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | 0.954 |
| EGL38490.1 | dnaK | HMPREF9126_0092 | HMPREF9126_0072 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.698 |
| EGL38490.1 | eno | HMPREF9126_0092 | HMPREF9126_0221 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.955 |
| EGL38490.1 | groL | HMPREF9126_0092 | HMPREF9126_0090 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.669 |
| EGL38490.1 | pnp | HMPREF9126_0092 | HMPREF9126_0432 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.983 |
| EGL38490.1 | sun | HMPREF9126_0092 | HMPREF9126_0744 | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.618 |
| EGL38618.1 | EGL38490.1 | HMPREF9126_0028 | HMPREF9126_0092 | Hypothetical protein; Displays ATPase and GTPase activities. | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.946 |
| EGL38618.1 | sun | HMPREF9126_0028 | HMPREF9126_0744 | Hypothetical protein; Displays ATPase and GTPase activities. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.414 |
| EGL38758.1 | EGL38490.1 | HMPREF9126_0091 | HMPREF9126_0092 | Hypothetical protein. | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.762 |
| EGL38758.1 | groL | HMPREF9126_0091 | HMPREF9126_0090 | Hypothetical protein. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.563 |
| EGL38941.1 | EGL35433.1 | HMPREF9126_0297 | HMPREF9126_1499 | Hypothetical protein; Belongs to the UPF0109 family. | R3H domain protein; Identified by match to protein family HMM PF01424. | 0.990 |
| EGL38941.1 | EGL38490.1 | HMPREF9126_0297 | HMPREF9126_0092 | Hypothetical protein; Belongs to the UPF0109 family. | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.809 |
| cshA | EGL38490.1 | HMPREF9126_1409 | HMPREF9126_0092 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | S1 RNA binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.954 |
| cshA | dnaK | HMPREF9126_1409 | HMPREF9126_0072 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.585 |
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