STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGL35884.1ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (289 aa)    
Predicted Functional Partners:
EGL35609.1
Hypothetical protein.
  
 0.944
EGL35321.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  0.799
EGL35964.1
Hypothetical protein.
       0.781
EGL35611.1
Hypothetical protein.
 
 0.774
ecfA-2
Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
0.756
EGL35724.1
ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005.
 
  
  0.721
EGL35616.1
Hypothetical protein.
  
 0.693
EGL35250.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  
  0.693
EGL38425.1
ABC transporter, ATP-binding family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
 
  0.690
EGL35289.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  0.684
Your Current Organism:
Parvimonas sp. F0139
NCBI taxonomy Id: 767100
Other names: P. sp. oral taxon 110 str. F0139, Parvimonas sp. oral taxon 110 str. F0139, Parvimonas sp. oral taxon 110 strain F0139
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