Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGL35188.1 | EGL35479.1 | HMPREF9126_0993 | HMPREF9126_1125 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.416 |
| EGL35188.1 | fabF | HMPREF9126_0993 | HMPREF9126_1244 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.603 |
| EGL35188.1 | glyA | HMPREF9126_0993 | HMPREF9126_0372 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.693 |
| EGL35366.1 | EGL35479.1 | HMPREF9126_1275 | HMPREF9126_1125 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.459 |
| EGL35366.1 | bioF | HMPREF9126_1275 | HMPREF9126_1412 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.475 |
| EGL35366.1 | fabF | HMPREF9126_1275 | HMPREF9126_1244 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.419 |
| EGL35479.1 | EGL35188.1 | HMPREF9126_1125 | HMPREF9126_0993 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.416 |
| EGL35479.1 | EGL35366.1 | HMPREF9126_1125 | HMPREF9126_1275 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | 0.459 |
| EGL35479.1 | EGL35532.1 | HMPREF9126_1125 | HMPREF9126_1126 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Hypothetical protein. | 0.693 |
| EGL35479.1 | EGL35726.1 | HMPREF9126_1125 | HMPREF9126_0897 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Hypothetical protein. | 0.438 |
| EGL35479.1 | EGL35885.1 | HMPREF9126_1125 | HMPREF9126_1360 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473. | 0.416 |
| EGL35479.1 | EGL38712.1 | HMPREF9126_1125 | HMPREF9126_0368 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | 0.535 |
| EGL35479.1 | bioF | HMPREF9126_1125 | HMPREF9126_1412 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.424 |
| EGL35479.1 | fabF | HMPREF9126_1125 | HMPREF9126_1244 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.500 |
| EGL35479.1 | glyA | HMPREF9126_1125 | HMPREF9126_0372 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.628 |
| EGL35479.1 | tmcAL | HMPREF9126_1125 | HMPREF9126_0408 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.472 |
| EGL35532.1 | EGL35479.1 | HMPREF9126_1126 | HMPREF9126_1125 | Hypothetical protein. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.693 |
| EGL35726.1 | EGL35479.1 | HMPREF9126_0897 | HMPREF9126_1125 | Hypothetical protein. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.438 |
| EGL35726.1 | EGL35885.1 | HMPREF9126_0897 | HMPREF9126_1360 | Hypothetical protein. | Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473. | 0.562 |
| EGL35885.1 | EGL35479.1 | HMPREF9126_1360 | HMPREF9126_1125 | Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.416 |
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