EGL35361.1 protein (Parvimonas sp. F0139) - STRING interaction network

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Score

EGL35361.1

RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. (233 aa)

Predicted Functional Partners:

cshA

0.948

rplQ

0.928

rplU

0.927

rplO

0.924

rplK

0.897

rplM

0.893

rplX

0.884

rplC

0.875

trmE

0.846

ysxC

0.820

Your Current Organism:

Parvimonas sp. F0139

NCBI taxonomy Id: 767100
Other names: P. sp. oral taxon 110 str. F0139, Parvimonas sp. oral taxon 110 str. F0139, Parvimonas sp. oral taxon 110 strain F0139

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGL35361.1	cshA	HMPREF9126_1408	HMPREF9126_1409	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	0.948
EGL35361.1	rplC	HMPREF9126_1408	HMPREF9126_0475	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.875
EGL35361.1	rplK	HMPREF9126_1408	HMPREF9126_0128	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L11 domain protein; N-terminal domain; an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03946.	0.897
EGL35361.1	rplM	HMPREF9126_1408	HMPREF9126_1555	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.893
EGL35361.1	rplO	HMPREF9126_1408	HMPREF9126_0456	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.924
EGL35361.1	rplQ	HMPREF9126_1408	HMPREF9126_0447	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.928
EGL35361.1	rplU	HMPREF9126_1408	HMPREF9126_0910	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.927
EGL35361.1	rplX	HMPREF9126_1408	HMPREF9126_0464	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.884
EGL35361.1	trmE	HMPREF9126_1408	HMPREF9126_1500	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.846
EGL35361.1	ysxC	HMPREF9126_1408	HMPREF9126_0488	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.	0.820
cshA	EGL35361.1	HMPREF9126_1409	HMPREF9126_1408	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	0.948
cshA	rplC	HMPREF9126_1409	HMPREF9126_0475	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.982
cshA	rplK	HMPREF9126_1409	HMPREF9126_0128	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	Ribosomal protein L11 domain protein; N-terminal domain; an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03946.	0.955
cshA	rplM	HMPREF9126_1409	HMPREF9126_1555	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.973
cshA	rplO	HMPREF9126_1409	HMPREF9126_0456	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.968
cshA	rplQ	HMPREF9126_1409	HMPREF9126_0447	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.945
cshA	rplU	HMPREF9126_1409	HMPREF9126_0910	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.940
cshA	rplX	HMPREF9126_1409	HMPREF9126_0464	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.976
cshA	trmE	HMPREF9126_1409	HMPREF9126_1500	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.708
cshA	ysxC	HMPREF9126_1409	HMPREF9126_0488	DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.	Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.	0.707