STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGL35934.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
EGL35185.1
Hypothetical protein.
       0.773
EGL35895.1
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.456
EGL35470.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.432
Your Current Organism:
Parvimonas sp. F0139
NCBI taxonomy Id: 767100
Other names: P. sp. oral taxon 110 str. F0139, Parvimonas sp. oral taxon 110 str. F0139, Parvimonas sp. oral taxon 110 strain F0139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.