Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV51221.1Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
    0.848
KRV49339.1
Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.607
KRV51500.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.580
KRV51220.1
Hemerythrin HHE cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.539
KRV48914.1
Erythromycin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.457
KRV50455.1
Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.442
KRV46817.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.404
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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