Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQ490_00720Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)    
Predicted Functional Partners:
KRV49761.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
KRV47708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.974
KRV51325.1
Xanthine dehydrogenase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.972
KRV47709.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.963
KRV48015.1
XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
KRV49871.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.926
KRV51323.1
Hydroxydechloroatrazine ethylaminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.742
KRV51510.1
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.741
KRV51320.1
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.713
KRV51513.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.709
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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