STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRV47531.1Cell shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
KRV49899.1
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.988
KRV47171.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.970
KRV50109.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.948
KRV49904.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.947
KRV51200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.725
KRV49898.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.625
AQ490_06435
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.616
KRV50518.1
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.560
KRV49900.1
Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.559
KRV49903.1
Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
 0.552
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.