Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV47542.1Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (721 aa)    
Predicted Functional Partners:
KRV47550.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.695
KRV51052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
   
 
 0.655
KRV51057.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.627
ftsQ
Hypothetical protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
   
 
 0.623
KRV50886.1
Type VII secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
   
 
 0.576
KRV48835.1
Cell wall assembly protein Knr4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.576
KRV51048.1
Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.557
KRV47541.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
KRV47543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.533
KRV49697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.509
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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