Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV47386.1Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)    
Predicted Functional Partners:
KRV47387.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.893
KRV48097.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
KRV47991.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.738
KRV48768.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.731
KRV49506.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.720
KRV48677.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.718
AQ490_16320
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.716
KRV46901.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.715
KRV47838.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.713
ureC
Urease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.543
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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