STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRV46355.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (923 aa)    
Predicted Functional Partners:
KRV48008.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.781
KRV47917.1
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.720
KRV47918.1
PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.720
KRV48685.1
PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.720
hutH
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.454
KRV46356.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
       0.443
KRV50117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
KRV49250.1
alpha-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.405
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.