Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
KRV46482.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)    
Predicted Functional Partners:
KRV46479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.807
KRV46483.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.800
KRV46481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.774
KRV46478.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KRV46480.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KRV46484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
KRV46485.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.727
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.675
KRV46477.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.613
KRV51391.1
Polynucleotide kinase-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.570
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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