Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV50316.1Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family. (275 aa)    
Predicted Functional Partners:
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.999
KRV50315.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KRV48667.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.943
KRV48934.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.620
gltD
Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.516
KRV50312.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
KRV50318.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
KRV50319.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
cobT
Hypothetical protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
       0.499
KRV50321.1
Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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