KRV50513.1 protein (Streptomyces vitaminophilus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KRV50513.1

Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)

Predicted Functional Partners:

AQ490_21390

0.926

KRV49144.1

0.925

KRV50756.1

0.875

KRV50593.1

0.828

KRV50594.1

0.828

KRV50596.1

0.828

KRV50591.1

0.791

AQ490_03070

0.766

KRV50592.1

0.730

KRV46756.1

0.729

Your Current Organism:

Streptomyces vitaminophilus

NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQ490_03070	AQ490_21390	AQ490_03070	AQ490_21390	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
AQ490_03070	KRV46756.1	AQ490_03070	AQ490_11580	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
AQ490_03070	KRV49144.1	AQ490_03070	AQ490_21285	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
AQ490_03070	KRV50513.1	AQ490_03070	AQ490_15665	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.766
AQ490_03070	KRV50591.1	AQ490_03070	AQ490_16150	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
AQ490_03070	KRV50592.1	AQ490_03070	AQ490_16155	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
AQ490_03070	KRV50593.1	AQ490_03070	AQ490_16160	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
AQ490_03070	KRV50594.1	AQ490_03070	AQ490_16165	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
AQ490_03070	KRV50596.1	AQ490_03070	AQ490_16175	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
AQ490_03070	KRV50756.1	AQ490_03070	AQ490_16135	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	0.983
AQ490_21390	AQ490_03070	AQ490_21390	AQ490_03070	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
AQ490_21390	KRV46756.1	AQ490_21390	AQ490_11580	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AQ490_21390	KRV49144.1	AQ490_21390	AQ490_21285	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AQ490_21390	KRV50513.1	AQ490_21390	AQ490_15665	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.926
AQ490_21390	KRV50591.1	AQ490_21390	AQ490_16150	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AQ490_21390	KRV50592.1	AQ490_21390	AQ490_16155	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AQ490_21390	KRV50593.1	AQ490_21390	AQ490_16160	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AQ490_21390	KRV50594.1	AQ490_21390	AQ490_16165	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AQ490_21390	KRV50596.1	AQ490_21390	AQ490_16175	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AQ490_21390	KRV50756.1	AQ490_21390	AQ490_16135	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	0.999

page 1 of 6

Server load: low (40%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About