Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV50752.1DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)    
Predicted Functional Partners:
KRV50158.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.624
KRV51267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.623
KRV50561.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.554
KRV50646.1
Cation-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.517
KRV50705.1
Cation-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.517
KRV46587.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.506
KRV47781.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
KRV48633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
KRV50844.1
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
     
  0.432
KRV50845.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.432
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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