Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV50566.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1002 aa)    
Predicted Functional Partners:
KRV47351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.947
KRV49543.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.936
KRV46907.1
beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.903
KRV48079.1
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.900
xylA
Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family.
    
 0.878
KRV51429.1
FAD-linked oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.873
KRV51287.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.870
KRV51159.1
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.870
KRV50580.1
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
  0.870
KRV50098.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.870
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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