Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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Databases
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[Homology]
Score
KRV50703.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)    
Predicted Functional Partners:
KRV50702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
AQ490_03070
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.735
KRV49409.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.613
KRV47009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.572
KRV47010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.572
KRV49608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.572
KRV48175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.572
KRV51492.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.553
KRV50704.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
mqnB
Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
    
  0.461
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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