Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV50099.1Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)    
Predicted Functional Partners:
KRV50098.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.829
KRV50097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.731
KRV50095.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
KRV50096.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
KRV50094.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
KRV47580.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.581
KRV51211.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.575
KRV49259.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.575
KRV46842.1
Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.575
KRV46631.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.575
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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