Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRV50061.1 | KRV50062.1 | AQ490_17740 | AQ490_17745 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.666 |
KRV50062.1 | KRV50061.1 | AQ490_17745 | AQ490_17740 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.666 |
KRV50062.1 | KRV50064.1 | AQ490_17745 | AQ490_17755 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.542 |
KRV50062.1 | KRV50065.1 | AQ490_17745 | AQ490_17760 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.542 |
KRV50064.1 | KRV50062.1 | AQ490_17755 | AQ490_17745 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.542 |
KRV50064.1 | KRV50065.1 | AQ490_17755 | AQ490_17760 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.834 |
KRV50065.1 | KRV50062.1 | AQ490_17760 | AQ490_17745 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.542 |
KRV50065.1 | KRV50064.1 | AQ490_17760 | AQ490_17755 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.834 |