Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV49962.1Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (492 aa)    
Predicted Functional Partners:
KRV48358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
    
 0.901
arcA
Arginine deiminase; Catalyzes the degradation of arginine to citruline and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.889
argH
Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.889
KRV46687.1
Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.880
KRV47300.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.596
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
     
 0.595
KRV47798.1
Spermine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.576
KRV49875.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.576
KRV49807.1
Spermidine synthase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.576
KRV48675.1
Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.576
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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