Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
KRV49895.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)    
Predicted Functional Partners:
KRV49894.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
KRV50321.1
Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.690
KRV49893.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
KRV50827.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.627
KRV51435.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.570
KRV51281.1
Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
KRV50174.1
Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.447
AQ490_22720
Coenzyme F420 biosynthesis-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
KRV48984.1
CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.408
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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