STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRV49445.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)    
Predicted Functional Partners:
KRV49510.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.885
KRV49444.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.819
KRV46633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.735
KRV50944.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.713
KRV47437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.663
KRV47223.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.641
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.607
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.606
atpG
ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.595
atpC
ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.582
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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