STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRV49011.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)    
Predicted Functional Partners:
KRV49010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.969
KRV49083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.872
KRV49009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
KRV49012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
KRV48181.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
KRV50758.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
KRV47936.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
KRV49086.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
KRV50615.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.409
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.