Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRV48533.1Toxin-antitoxin system toxin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (74 aa)    
Predicted Functional Partners:
KRV48532.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.894
KRV50158.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
KRV48623.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
KRV49017.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
KRV49638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
KRV48100.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
KRV49482.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
KRV49178.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.554
KRV47146.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.552
KRV50330.1
zf-TFIIB domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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