STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRV48125.1Caunorubicin/doxorubicin resistance ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)    
Predicted Functional Partners:
KRV48126.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.982
AQ490_08485
Transport permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.952
KRV46983.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.883
KRV50555.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.873
KRV47437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.663
KRV46633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.663
KRV50944.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.663
KRV47223.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.641
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.607
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.606
Your Current Organism:
Streptomyces vitaminophilus
NCBI taxonomy Id: 76728
Other names: ATCC 31673, Actinosporangium vitaminiphilum, Actinosporangium vitaminophilum, DSM 41686, IFO 14294, JCM 6054, NBRC 14294, NRRL B-16933, S. vitaminophilus, Streptomyces vitaminiphilus, Streptomyces vitaminophileus, strain SF 2080
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