STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORF031Hypothetical protein. (31 aa)    
Predicted Functional Partners:
ALV05532.1
Bacteriochlorophyllide reductase subunit Y BchY; Pfam:pfam00148 Nitrogenase component 1 type Oxidoreductase.
       0.773
ALV05533.1
Chlorophyllide reductase subunit Z; Pfam:pfam00148 Nitrogenase component 1 type Oxidoreductase.
       0.773
pufB
LH1 beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
       0.773
ALV05531.1
Chitin-binding protein; Pfam:pfam00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; Belongs to the NifH/BchL/ChlL family.
       0.746
ORF074
Hypothetical protein.
       0.648
pufA
LH1 alpha subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
       0.631
ALV05530.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase, putative; Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
       0.595
pufL
Photosynthetic reaction center L subunit; Pfam:pfam00124 Photosynthetic reaction centre protein; Belongs to the reaction center PufL/M/PsbA/D family.
       0.432
ALV05529.1
Hydroxyneurosporene-O-methyltransferase; Pfam:pfam00891 O-methyltransferase.
       0.425
ALV05528.1
Geranyltranstransferase; Pfam:pfam00348 Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.415
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.