STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV05728.1Pfam:pfam00005 ABC transporter. (583 aa)    
Predicted Functional Partners:
ALV05727.1
Pfam:pfam00005 ABC transporter.
 
  
 
0.982
ALV05480.1
Toluene ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
     
0.724
ALV04724.1
Phosphate ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
     
0.696
ALV05459.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
     
0.659
ALV05156.1
Hypothetical protein; Pfam:pfam00266 Aminotransferase class-V.
 
 
 0.550
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.470
ALV06285.1
Type I secretion system ATPase; Pfam:pfam00005 ABC transporter.
   
  
0.470
ALV06888.1
ABC-type bacteriocin/lantibiotic exporter; Pfam:pfam00005 ABC transporter.
   
  
0.470
ALV04831.1
ABC transporter, HlyB/MsbA family; Pfam:pfam00005 ABC transporter.
   
  
0.470
ALV07750.1
Putative ATP-binding cassette sub-family B member 9-like; Pfam:pfam00005 ABC transporter.
   
  
0.470
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.