STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV05911.1Pfam:pfam02470 mce related protein. (321 aa)    
Predicted Functional Partners:
ALV05909.1
ABC-type transport system permease component USSDB6A; Pfam:pfam02405 Permease; involved in resistance to organic solvents.
 
 0.995
ALV05910.1
Iron ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 0.994
ALV05481.1
ABC transporter permease; Pfam:pfam02405 Permease.
  
 0.959
ALV05480.1
Toluene ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
  
 0.953
ALV05482.1
ABC transporter substrate-binding protein; Pfam:pfam02470 mce related protein.
     
 0.913
ALV05484.1
Hypothetical protein; Pfam:pfam13466 STAS domain.
  
 0.886
ALV05912.1
Pfam:pfam03886 Protein of unknown function (DUF330).
  
   0.698
ALV06559.1
Putative signal transduction protein; Pfam:pfam01740 STAS domain.
  
   0.686
ALV06560.1
Putative signal transduction protein; Pfam:pfam14361 RsbT co-antagonist protein rsbRD N-terminal domain.
  
   0.686
ALV06230.1
Outer membrane chemotaxis MotB protein; Pfam:pfam13677 Membrane MotB of proton-channel complex MotA/MotB.
   
   0.496
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.