STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV06070.1Pfam:pfam00069 Protein kinase domain. (799 aa)    
Predicted Functional Partners:
ALV06069.1
HDOD domain-containing protein,protein kinase family protein; Pfam:pfam08668 HDOD domain.
 
    
0.853
ALV09138.1
Pfam:pfam00481 Protein phosphatase 2C.
 
 
 0.835
ALV08164.1
Pfam:pfam13672 Protein phosphatase 2C.
 
 
 0.828
ALV07103.1
Pfam:pfam13672 Protein phosphatase 2C.
 
 
 0.823
ALV05963.1
Pfam:pfam13672 Protein phosphatase 2C.
 
 
 0.812
ALV09137.1
Pfam:pfam00498 FHA domain.
 
 
 
 0.800
ALV08869.1
Histidine kinase; Pfam:pfam08668 HDOD domain.
  
     0.686
ALV06061.1
Pfam:pfam00211 Adenylate and Guanylate cyclase catalytic domain.
 
 
 0.589
RD2015_82
Hypothetical protein; Pfam:pfam00990 GGDEF domain.
 
 
 
 0.519
ALV08948.1
Two component response regulator sensor histidine kinase/response regulator subunits; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 
 0.518
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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