STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV06249.1Cyclic di-GMP phosphodiesterase Gmr; Pfam:pfam00563 EAL domain. (726 aa)    
Predicted Functional Partners:
ALV08948.1
Two component response regulator sensor histidine kinase/response regulator subunits; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.969
ALV05632.1
Multi-sensor hybrid histidine kinase; Pfam:pfam03924 CHASE domain.
 
 
 0.880
ALV06248.1
Diguanylate cyclase (GGDEF) domain-containing protein; Pfam:pfam00990 GGDEF domain.
 
 
0.861
ALV09053.1
PAS/PAC sensor hybrid histidine kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
0.836
ALV06520.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
0.831
ALV08534.1
Signal transduction histidine kinase-like protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.829
ALV06898.1
PAS domain S-box; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.827
ALV05633.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
0.814
RD2015_82
Hypothetical protein; Pfam:pfam00990 GGDEF domain.
 
 
0.814
ALV06250.1
Hypothetical protein; Pfam:pfam01627 Hpt domain.
  
 
 0.812
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.