STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV06492.1ABC-type branched-chain amino acid transport system, periplasmic component; Pfam:pfam13458 Periplasmic binding protein. (439 aa)    
Predicted Functional Partners:
ALV05876.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.872
ALV08960.1
Pfam:pfam00005 ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.862
ALV05091.1
ABC transporter-related protein; Pfam:pfam00005 ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.862
ALV05875.1
Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.842
ALV05877.1
Branched-chain amino acid ABC transporter substrate-binding protein; Pfam:pfam00005 ABC transporter.
 
  
 0.817
tsaD
Protein kinase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
     
 0.779
ALV06490.1
[2Fe-2S] ferredoxin Fdx; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
       0.736
ALV05878.1
Mannosyltransferase; Pfam:pfam00005 ABC transporter.
 
  
 0.674
ALV04645.1
Leucine/isoleucine/valine transporter permease subunit; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.633
hscA
Molecular chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
       0.633
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.