Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALV06554.1 | ALV06822.1 | RD2015_2079 | RD2015_2351 | Iron transporter; Pfam:pfam00593 TonB dependent receptor. | Protein TolA; Pfam:pfam13103 TonB C terminal. | 0.686 |
ALV06822.1 | ALV06554.1 | RD2015_2351 | RD2015_2079 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Iron transporter; Pfam:pfam00593 TonB dependent receptor. | 0.686 |
ALV06822.1 | ALV06823.1 | RD2015_2351 | RD2015_2352 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | 0.942 |
ALV06822.1 | ALV07775.1 | RD2015_2351 | RD2015_3317 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | 0.735 |
ALV06822.1 | ALV07776.1 | RD2015_2351 | RD2015_3318 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | 0.735 |
ALV06822.1 | ALV07777.1 | RD2015_2351 | RD2015_3319 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Biopolymer transport protein ExbB; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family. | 0.669 |
ALV06822.1 | ALV09009.1 | RD2015_2351 | RD2015_4568 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Flagellar motor protein MotA; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family. | 0.669 |
ALV06822.1 | ALV09010.1 | RD2015_2351 | RD2015_4569 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | 0.735 |
ALV06822.1 | ALV09157.1 | RD2015_2351 | RD2015_4718 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Pfam:pfam07715 TonB-dependent Receptor Plug Domain. | 0.686 |
ALV06822.1 | ALV09179.1 | RD2015_2351 | RD2015_4741 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Putative TonB-dependent receptor; Pfam:pfam00593 TonB dependent receptor. | 0.686 |
ALV06822.1 | tolQ | RD2015_2351 | RD2015_2353 | Protein TolA; Pfam:pfam13103 TonB C terminal. | Protein tolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.892 |
ALV06823.1 | ALV06822.1 | RD2015_2352 | RD2015_2351 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Protein TolA; Pfam:pfam13103 TonB C terminal. | 0.942 |
ALV06823.1 | ALV07777.1 | RD2015_2352 | RD2015_3319 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Biopolymer transport protein ExbB; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family. | 0.916 |
ALV06823.1 | ALV09009.1 | RD2015_2352 | RD2015_4568 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Flagellar motor protein MotA; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family. | 0.935 |
ALV06823.1 | tolQ | RD2015_2352 | RD2015_2353 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Protein tolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.983 |
ALV07775.1 | ALV06822.1 | RD2015_3317 | RD2015_2351 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Protein TolA; Pfam:pfam13103 TonB C terminal. | 0.735 |
ALV07775.1 | ALV07776.1 | RD2015_3317 | RD2015_3318 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | 0.787 |
ALV07775.1 | ALV07777.1 | RD2015_3317 | RD2015_3319 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Biopolymer transport protein ExbB; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family. | 0.982 |
ALV07775.1 | ALV09009.1 | RD2015_3317 | RD2015_4568 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Flagellar motor protein MotA; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family. | 0.913 |
ALV07775.1 | tolQ | RD2015_3317 | RD2015_2353 | Pfam:pfam02472 Biopolymer transport protein ExbD/TolR. | Protein tolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.794 |
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