STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV04760.1Putative permease. (303 aa)    
Predicted Functional Partners:
ALV04761.1
Pfam:pfam00255 Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.548
ALV08080.1
Hypothetical protein.
  
     0.494
ALV07456.1
Pfam:pfam10993 Protein of unknown function (DUF2818).
  
     0.445
ALV04759.1
Hypothetical protein.
       0.439
ALV08707.1
Cytochrome C biogenesis protein ResB; Pfam:pfam05140 ResB-like family.
  
     0.403
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.