STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV04776.1Hypothetical protein; Pfam:pfam02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family. (545 aa)    
Predicted Functional Partners:
ALV08893.1
Cytochrome C550; Pfam:pfam00768 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.919
ALV04767.1
Peptidase S66; Pfam:pfam02016 LD-carboxypeptidase.
 
  
 0.723
ALV04778.1
Pfam:pfam02016 LD-carboxypeptidase.
 
  
 0.709
ALV07785.1
Pfam:pfam02016 LD-carboxypeptidase.
 
  
 0.675
mtgA
Penicillin-binding protein F; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 0.674
ALV07097.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
    0.523
ALV07140.1
Pfam:pfam01263 Aldose 1-epimerase.
  
    0.523
ALV06591.1
Pfam:pfam12158 Protein of unknown function (DUF3592).
   
 
 0.477
ALV07084.1
Hypothetical protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
   
 
 0.477
ALV07611.1
Ankyrin; Pfam:pfam12796 Ankyrin repeats (3 copies).
   
 
 0.477
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.