STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV07210.1Hypothetical protein. (721 aa)    
Predicted Functional Partners:
ALV05444.1
Pfam:pfam03934 Type II secretion system (T2SS), protein K.
  
 
 0.667
ALV06833.1
Hypothetical protein.
  
 
 0.594
ALV07211.1
Luciferase family oxidoreductase, group 1; Pfam:pfam00296 Luciferase-like monooxygenase.
       0.594
ALV05445.1
General secretion pathway protein GspJ; Pfam:pfam11612 Type II secretion system (T2SS), protein J.
  
 
 0.594
ALV06434.1
Putative transporter DNA uptake transmembrane protein; Pfam:pfam03772 Competence protein.
  
  
 0.591
ALV05494.1
Pfam:pfam00482 Type II secretion system (T2SS), protein F.
  
  
 0.551
ALV06807.1
Hypothetical protein.
  
  
 0.551
ALV05438.1
Pfam:pfam00482 Type II secretion system (T2SS), protein F.
  
  
 0.551
ALV05495.1
Type II traffic warden ATPase; Pfam:pfam00437 Type II/IV secretion system protein.
  
 
 0.544
ALV06164.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Pfam:pfam00437 Type II/IV secretion system protein.
  
 
 0.544
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.