STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV07431.1Hypothetical protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3. (306 aa)    
Predicted Functional Partners:
ALV05247.1
Hypothetical protein.
  
     0.742
ALV08627.1
Hypothetical protein; Pfam:pfam11849 Domain of unknown function (DUF3369).
 
     0.688
RD2015_81
Hypothetical protein.
  
     0.598
ALV05738.1
Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.592
ALV07430.1
Patatin; Pfam:pfam01734 Patatin-like phospholipase.
       0.529
ALV08060.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.529
ALV07432.1
ABC transporter substrate-binding protein; Pfam:pfam03480 Bacterial extracellular solute-binding protein, family 7.
     
 0.459
ALV08948.1
Two component response regulator sensor histidine kinase/response regulator subunits; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 
 0.432
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.