Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALV05323.1 | ALV05704.1 | RD2015_827 | RD2015_1213 | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Carbonate dehydratase; Pfam:pfam00194 Eukaryotic-type carbonic anhydrase. | 0.926 |
| ALV05323.1 | cynS | RD2015_827 | RD2015_3379 | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.937 |
| ALV05704.1 | ALV05323.1 | RD2015_1213 | RD2015_827 | Carbonate dehydratase; Pfam:pfam00194 Eukaryotic-type carbonic anhydrase. | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.926 |
| ALV05704.1 | cynS | RD2015_1213 | RD2015_3379 | Carbonate dehydratase; Pfam:pfam00194 Eukaryotic-type carbonic anhydrase. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.900 |
| ALV07835.1 | ALV07837.1 | RD2015_3378 | RD2015_3380 | Glycosyl transferase family 14; Pfam:pfam02485 Core-2/I-Branching enzyme. | Asp/Glu/hydantoin racemase; Pfam:pfam01613 Flavin reductase like domain. | 0.467 |
| ALV07835.1 | cynS | RD2015_3378 | RD2015_3379 | Glycosyl transferase family 14; Pfam:pfam02485 Core-2/I-Branching enzyme. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.509 |
| ALV07837.1 | ALV07835.1 | RD2015_3380 | RD2015_3378 | Asp/Glu/hydantoin racemase; Pfam:pfam01613 Flavin reductase like domain. | Glycosyl transferase family 14; Pfam:pfam02485 Core-2/I-Branching enzyme. | 0.467 |
| ALV07837.1 | ALV07838.1 | RD2015_3380 | RD2015_3381 | Asp/Glu/hydantoin racemase; Pfam:pfam01613 Flavin reductase like domain. | Pfam:pfam00582 Universal stress protein family. | 0.485 |
| ALV07837.1 | cynS | RD2015_3380 | RD2015_3379 | Asp/Glu/hydantoin racemase; Pfam:pfam01613 Flavin reductase like domain. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.701 |
| ALV07838.1 | ALV07837.1 | RD2015_3381 | RD2015_3380 | Pfam:pfam00582 Universal stress protein family. | Asp/Glu/hydantoin racemase; Pfam:pfam01613 Flavin reductase like domain. | 0.485 |
| ALV07838.1 | cynS | RD2015_3381 | RD2015_3379 | Pfam:pfam00582 Universal stress protein family. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.445 |
| ALV08844.1 | ALV08845.1 | RD2015_4403 | RD2015_4404 | Nitrate transport ATP-binding subunits C and D; Pfam:pfam00005 ABC transporter. | Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.999 |
| ALV08844.1 | ALV08846.1 | RD2015_4403 | RD2015_4405 | Nitrate transport ATP-binding subunits C and D; Pfam:pfam00005 ABC transporter. | Nitrate transporter; Pfam:pfam13379 NMT1-like family. | 0.998 |
| ALV08844.1 | cynS | RD2015_4403 | RD2015_3379 | Nitrate transport ATP-binding subunits C and D; Pfam:pfam00005 ABC transporter. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.462 |
| ALV08845.1 | ALV08844.1 | RD2015_4404 | RD2015_4403 | Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Nitrate transport ATP-binding subunits C and D; Pfam:pfam00005 ABC transporter. | 0.999 |
| ALV08845.1 | ALV08846.1 | RD2015_4404 | RD2015_4405 | Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Nitrate transporter; Pfam:pfam13379 NMT1-like family. | 0.996 |
| ALV08845.1 | cynS | RD2015_4404 | RD2015_3379 | Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.553 |
| ALV08846.1 | ALV08844.1 | RD2015_4405 | RD2015_4403 | Nitrate transporter; Pfam:pfam13379 NMT1-like family. | Nitrate transport ATP-binding subunits C and D; Pfam:pfam00005 ABC transporter. | 0.998 |
| ALV08846.1 | ALV08845.1 | RD2015_4405 | RD2015_4404 | Nitrate transporter; Pfam:pfam13379 NMT1-like family. | Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.996 |
| ALV08846.1 | cynS | RD2015_4405 | RD2015_3379 | Nitrate transporter; Pfam:pfam13379 NMT1-like family. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.492 |
page 1 of 2