STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV08435.1Bacterioferritin; Iron-storage protein. (160 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.919
ALV06880.1
Bacterioferritin; Pfam:pfam00210 Ferritin-like domain.
  
  
  0.915
ALV07283.1
Pfam:pfam01126 Heme oxygenase.
     
 0.902
ALV08434.1
BFD/(2Fe-2S)-binding domain-containing protein; Pfam:pfam04324 BFD-like [2Fe-2S] binding domain.
  
 
 0.902
ALV06557.1
Pfam:pfam07228 Stage II sporulation protein E (SpoIIE).
   
  
 0.840
ALV08841.1
Putative anaerobic dehydrogenase; Pfam:pfam00384 Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.725
ALV06562.1
Two component hybrid sensor histidine kinase/response regulator protein; Pfam:pfam05227 CHASE3 domain.
   
  
 0.661
ALV06559.1
Putative signal transduction protein; Pfam:pfam01740 STAS domain.
   
  
 0.609
ALV06560.1
Putative signal transduction protein; Pfam:pfam14361 RsbT co-antagonist protein rsbRD N-terminal domain.
   
  
 0.609
ALV06467.1
Hypothetical protein.
   
  
 0.524
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.