Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALV06783.1 | ALV08667.1 | RD2015_2312 | RD2015_4220 | Pfam:pfam05175 Methyltransferase small domain; Belongs to the protein N5-glutamine methyltransferase family. | Pfam:pfam04794 YdjC-like protein. | 0.401 |
ALV07660.1 | ALV07661.1 | RD2015_3200 | RD2015_3201 | Hypothetical protein; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | Glycosyltransferase; Pfam:pfam00535 Glycosyl transferase family 2. | 0.809 |
ALV07660.1 | ALV08667.1 | RD2015_3200 | RD2015_4220 | Hypothetical protein; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | Pfam:pfam04794 YdjC-like protein. | 0.443 |
ALV07661.1 | ALV07660.1 | RD2015_3201 | RD2015_3200 | Glycosyltransferase; Pfam:pfam00535 Glycosyl transferase family 2. | Hypothetical protein; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.809 |
ALV07661.1 | ALV08666.1 | RD2015_3201 | RD2015_4219 | Glycosyltransferase; Pfam:pfam00535 Glycosyl transferase family 2. | Glycosyl transferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.787 |
ALV07661.1 | ALV08667.1 | RD2015_3201 | RD2015_4220 | Glycosyltransferase; Pfam:pfam00535 Glycosyl transferase family 2. | Pfam:pfam04794 YdjC-like protein. | 0.442 |
ALV08664.1 | ALV08665.1 | RD2015_4217 | RD2015_4218 | Putative phosphohydrolase; Pfam:pfam00149 Calcineurin-like phosphoesterase. | Pfam:pfam00535 Glycosyl transferase family 2. | 0.515 |
ALV08664.1 | ALV08666.1 | RD2015_4217 | RD2015_4219 | Putative phosphohydrolase; Pfam:pfam00149 Calcineurin-like phosphoesterase. | Glycosyl transferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.515 |
ALV08664.1 | ALV08667.1 | RD2015_4217 | RD2015_4220 | Putative phosphohydrolase; Pfam:pfam00149 Calcineurin-like phosphoesterase. | Pfam:pfam04794 YdjC-like protein. | 0.515 |
ALV08665.1 | ALV08664.1 | RD2015_4218 | RD2015_4217 | Pfam:pfam00535 Glycosyl transferase family 2. | Putative phosphohydrolase; Pfam:pfam00149 Calcineurin-like phosphoesterase. | 0.515 |
ALV08665.1 | ALV08666.1 | RD2015_4218 | RD2015_4219 | Pfam:pfam00535 Glycosyl transferase family 2. | Glycosyl transferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.964 |
ALV08665.1 | ALV08667.1 | RD2015_4218 | RD2015_4220 | Pfam:pfam00535 Glycosyl transferase family 2. | Pfam:pfam04794 YdjC-like protein. | 0.909 |
ALV08665.1 | ALV08668.1 | RD2015_4218 | RD2015_4221 | Pfam:pfam00535 Glycosyl transferase family 2. | Hypothetical protein. | 0.509 |
ALV08666.1 | ALV07661.1 | RD2015_4219 | RD2015_3201 | Glycosyl transferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | Glycosyltransferase; Pfam:pfam00535 Glycosyl transferase family 2. | 0.787 |
ALV08666.1 | ALV08664.1 | RD2015_4219 | RD2015_4217 | Glycosyl transferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | Putative phosphohydrolase; Pfam:pfam00149 Calcineurin-like phosphoesterase. | 0.515 |
ALV08666.1 | ALV08665.1 | RD2015_4219 | RD2015_4218 | Glycosyl transferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | Pfam:pfam00535 Glycosyl transferase family 2. | 0.964 |
ALV08666.1 | ALV08667.1 | RD2015_4219 | RD2015_4220 | Glycosyl transferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | Pfam:pfam04794 YdjC-like protein. | 0.912 |
ALV08666.1 | ALV08668.1 | RD2015_4219 | RD2015_4221 | Glycosyl transferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | Hypothetical protein. | 0.509 |
ALV08667.1 | ALV06783.1 | RD2015_4220 | RD2015_2312 | Pfam:pfam04794 YdjC-like protein. | Pfam:pfam05175 Methyltransferase small domain; Belongs to the protein N5-glutamine methyltransferase family. | 0.401 |
ALV08667.1 | ALV07660.1 | RD2015_4220 | RD2015_3200 | Pfam:pfam04794 YdjC-like protein. | Hypothetical protein; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.443 |
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